A3
Evolution and Ecology

Molecular determinants underlying symbiosis in the wheat metaorganism

Project A3 (PIs Stukenbrock, Dagan) aims to characterize the genetic basis underlying eco-evolutionary interactions among plant hosts and their microbiome. Focusing on wheat and its associated fungi and bacteria, the project will study the role of plant immune receptors in shaping the endophytic microbial community and identify bacterial traits that determine the temporal and spatial distribution of a bacterium in the plant habitat.

A3
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A3
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2023
A3
B4

T6SS-mediated competitive exclusion among Pantoea agglomerans associated with plants

Kai Ripcke, Devani Romero Picazo, Shreya Vichare, Daniel Unterweger, Tal Dagan, Nils Fredrik Huelter (2023) bioRxiv 2023.03.17.533219; doi: https://doi.org/10.1101/2023.03.17.533219
2022
A3
B4

Denitrification in foraminifera has ancient origin and is complemented by associated bacteria.

Woehle C, Roy A-S, Glock N, Michels J, Wein T, Weissenbach J, Romero D, Hiebenthal C, Gorb SN, Schönfeld J, Dagan T (2022) PNAS. 119(25):e2200198119 doi: 1073/pnas.2200198119

2021
A3
B4

Colonization dynamics of Pantoea agglomerans in the wheat root habitat

Soluch R, Hülter NF, Romero Picazo D, Özkurt E, H Stukenbrock E, Dagan T (2021) Environ Microbiol. 23(4):2260-2273. doi: 10.1111/1462-2920.15430.

2020
A3

Seed-derived microbial colonization of wild emmer and domesticated bread wheat (Triticum dicoccoides and T. aestivum) seedlings shows pronounced differences in overall diversity and composition

Özkurt E, Hassani MA, Sesiz U, Künzel S, Dagan T, Özkan H, H. Stukenbrock E (2020) mBio. 11(6): e02637-20. doi: 10.1128/mBio.02637-20

2020
A3

Ecological assembly processes of the bacterial and fungal microbiota of wild and domesticated wheat species

Hassani MA, Özkurt E, Franzenburg S, H Stukenbrock E (2020) Phytobiomes Journal. 4(3):217-224. doi: 10.1094/PBIOMES-01-20-0001-SC
2020
A2
A3
Featured

A fungal pathogen induces systemic susceptibility and systemic shifts in wheat metabolome and microbiome composition

Seybold H, Demetrowitsch TJ, Hassani M A, Szymczak S, Reim E, Haueisen J, Lübbers L, Rühlemann M, Franke A, Schwarz k, H. Stukenbrock E (2020) Nature Communications. 11(1):1910. doi: 10.1038/s41467-020-15633-x

2019
A3
A4
B2
C1
C2
INF
Featured

Advancing our functional understanding of host–microbiota interactions: a need for new types of studies

He J, Lange J, Marinos G, Bathia J, Harris D, Soluch R, Vaibhvi V, Deines P, Hassani MA, Wagner K-S, Zapien‐Campos R, Jaspers C, Sommer F (2019) BioEssays, 1900211 (1-5). doi: 10.1002/bies.201900211

 

2019
A1
A2
A3
B1
B2
C1
C2
INF
Z3
Featured

Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms

Rausch P, Rühlemann M, Hermes BM, Doms S, Dagan T, Dierking K, Domin H, Fraune S, von Frieling J, Hentschel U, Heinsen F-A, Höppner M, Jahn MT, Jaspers C, Kissoyan KAB, Langfeldt D, Rehman A, Reusch TBH, Roeder T, Schmitz RA, Schulenburg H, Soluch R, Sommer F, Stukenbrock E, Weiland-Bräuer N, Rosenstiel P, Franke A, Bosch T, Baines JF (2019) Microbiome, doi: 10.1186/s40168-019-0743-1

2019
A3

Interactions and coadaptation in plant metaorganisms

Hassani MA, Özkurt E, Seybold H, Dagan T, Stukenbrock EH (2019) Annu Rev Phytopathol. 57: 483-503. doi: 10.1146/annurev-phyto-082718-100008

2019
A3

Nutzpflanzen nachhaltig vor Krankheiten schützen?

Seybold H, Haueisen J, H Stukenbrock E (2019) BIOspektrum, 25:3, 254-257, doi: 10.1007/s12268-019-1037-7

2018
A3
INF

The genomic rate of adaptation in the fungal wheat pathogen Zymoseptoria tritici

Grandaubert J, Dutheil JY, Stukenbrock EH (2019) Evolution Letters, doi: 10.1101/176727

 

2018
A3
C1

Carrying capacity and colonization dynamics of Curvibacter in the Hydra host habitat

Wein T, Dagan T, Fraune S, Bosch TCG, Reusch TBH and Hülter NF (2018) Front. Microbiol.,  https://doi.org/10.3389/fmicb.2018.00443

2018
A1
A2
A3
A4
B1
B2
C1
Z1

Metaorganisms in extreme environments: do microbes play a role in organismal adaptation?

Bang C, Dagan T, Deines P, Dubilier N, Duschl W J, Fraune S, Hentschel U, Hirt H, Hülter N, Lachnit T, Picazo D, Galan P L, Pogoreutz C, Rädecker N, Saad M M, Schmitz R A, Schulenburg H, Voolstra C R, Weiland-Bräuer N, Ziegler M, Bosch T C G (2018); Zoology, doi: 10.1016/j.zool.2018.02.004

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